Adapt to new reaper options (--secret, --key)

- remove unnecessary dependencies
- reinstate run-dev-osx.sh

fix AnalysisHandler.download when ticket is None

Change default ports

Add EEG datatype

handle date-related edge case (no data in db) in usage reports

handle missing/incomplete subject data edge case in project report

Add zip options to analysis files

Usage/Data Consumption Report

Fix replace_metadata flag

Up result size for api/search/fields

* add uid and uid-match upload tests

* increase coverage of engine uploads w/ job (+enable job creation from data_builder)

* add test_roothandler.py to cover the /api root endpoint

* add more tests for session template compliance checking

* add tests to cover project/collection stats retrieval (requested w/ stats=true)

* add tests to cover most of api/handlers/userhandler.py

* make sure that unit test coverage is included in the overall report

Add hdf5 file type

Update permission references in RuleHandler ('r' -> 'ro')

Some files have `.h5`, others `.hdf5`.

Case-insensitive rules, and gear list filters